Publications

2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and MononegaviralesKuhn, J. H., Adkins, S., Alioto, D., Alkhovsky, S. V., Amarasinghe, G. K., Anthony, S. J., Avšič-Županc, T., Ayllón, M. A., Bahl, J., Balkema-Buschmann, A., Ballinger, M. J., Bartonička, T., Basler, C., Bavari, S., Beer, M., Bente, D. A., Bergeron, É., … Read more

VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses

VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses Guo, J., Bolduc, B., Zayed, A. A., Varsani, A., Dominguez-Huerta, G., Delmont, T. O., Pratama, A. A., Gazitúa, M. C., Vik, D., Sullivan, M. B. & Roux, S., Dec 2021, In: Microbiome. 9, 1, 37. Research output: Contribution to journal › Article › … Read more

Pan-Enterovirus Amplicon-Based High-Throughput Sequencing Detects the Complete Capsid of a EVA71 Genotype C1 Variant via Wastewater-Based Epidemiology in Arizona

Pan-Enterovirus Amplicon-Based High-Throughput Sequencing Detects the Complete Capsid of a EVA71 Genotype C1 Variant via Wastewater-Based Epidemiology in Arizona Faleye, T. O. C., Driver, E., Bowes, D., Adhikari, S., Adams, D., Varsani, A., Halden, R. U. & Scotch, M., Jan 7 2021, In: Viruses. 13, 1 Research output: Contribution to journal › Article › peer-review

The vaginal virome-balancing female genital tract bacteriome, mucosal immunity, and sexual and reproductive health outcomes?

The vaginal virome-balancing female genital tract bacteriome, mucosal immunity, and sexual and reproductive health outcomes? Happel, A. U., Varsani, A., Balle, C., Passmore, J. A. & Jaspan, H., Aug 2020, In: Viruses. 12, 8, 832. Research output: Contribution to journal › Review article › peer-review

Identification and distribution of novel cressdnaviruses and circular molecules in four penguin species in south georgia and the antarctic peninsula

Identification and distribution of novel cressdnaviruses and circular molecules in four penguin species in south georgia and the antarctic peninsula Levy, H., Fontenele, R. S., Harding, C., Suazo, C., Kraberger, S., Schmidlin, K., Djurhuus, A., Black, C. E., Hart, T., Smith, A. L. & Varsani, A., Sep 2020, In : Viruses. 12, 9, 1029. Research … Read more

Diverse genomoviruses representing twenty-nine species identified associated with plants

Diverse genomoviruses representing twenty-nine species identified associated with plants Fontenele, R. S., Roumagnac, P., Richet, C., Kraberger, S., Stainton, D., Aleamotu‘a, M., Filloux, D., Bernardo, P., Harkins, G. W., McCarthy, J., Charles, L. S., Lamas, N. S., Abreu, E. F. M., Abreu, R. A., Batista, G. B., Lacerda, A. L. M., Salywon, A., Wojciechowski, M. … Read more

Identification of Circovirus Genome in a Chinstrap Penguin (Pygoscelis antarcticus) and Adélie Penguin (Pygoscelis adeliae) on the Antarctic Peninsula

Identification of Circovirus Genome in a Chinstrap Penguin (Pygoscelis antarcticus) and Adélie Penguin (Pygoscelis adeliae) on the Antarctic Peninsula Levy, H., Fiddaman, S. R., Djurhuus, A., Black, C. E., Kraberger, S., Smith, A. L., Hart, T. & Varsani, A., Aug 6 2020, In : Viruses. 12, 8 Research output: Contribution to journal › Article

Blueberry red ringspot virus genomes from Florida inferred through analysis of blueberry root transcriptomes

Blueberry red ringspot virus genomes from Florida inferred through analysis of blueberry root transcriptomes Saad, N., Alcalá-Briseño, R. I., Polston, J. E., Olmstead, J. W., Varsani, A. & Harmon, P. F., Dec 1 2020, In : Scientific reports. 10, 1, 12043. Research output: Contribution to journal › Article

Diet segregation in Adélie penguins: Some individuals attempt to overcome colony-induced and annual foraging challenges

Diet segregation in Adélie penguins: Some individuals attempt to overcome colony-induced and annual foraging challenges Massaro, M., Ainley, D. G., Santora, J. A., Quillfeldt, P., Lescroël, A., Whitehead, A., Varsani, A., Ballard, G. & Lyver, P. O. B., Jul 9 2020, In : Marine Ecology Progress Series. 645, p. 205-218 14 p. Research output: Contribution … Read more

An 81-Nucleotide Deletion in SARS-CoV-2 ORF7a Identified from Sentinel Surveillance in Arizona (January to March 2020)

An 81-Nucleotide Deletion in SARS-CoV-2 ORF7a Identified from Sentinel Surveillance in Arizona (January to March 2020) Holland, L. R. A., Kaelin, E. A., Maqsood, R., Estifanos, B., Wu, L. I., Varsani, A., Halden, R. U., Hogue, B. G., Scotch, M. & Lim, E. S., Jul 1 2020, In : Journal of virology. 94, 14 Research … Read more

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