Publications

Discovery of known and novel viruses in wild and cultivated blueberry in florida through viral metagenomic approaches

Discovery of known and novel viruses in wild and cultivated blueberry in florida through viral metagenomic approaches Saad, N., Olmstead, J. W., Varsani, A., Polston, J. E., Jones, J. B., Folimonova, S. Y. & Harmon, P. F., Jun 2021, In: Viruses. 13, 6, 1165.Research output: Contribution to journal › Article › peer-review

New world cactaceae plants harbor diverse geminiviruses

New world cactaceae plants harbor diverse geminiviruses Fontenele, R. S., Salywon, A. M., Majure, L. C., Cobb, I. N., Bhaskara, A., Avalos-Calleros, J. A., Argüello-Astorga, G. R., Schmidlin, K., Khalifeh, A., Smith, K., Schreck, J., Lund, M. C., Köhler, M., Wojciechowski, M. F., Hodgson, W. C., Puente-Martinez, R., Van Doorslaer, K., Kumari, S., Oyeniran, K. … Read more

A pilot study investigating the dynamics of pigeon circovirus recombination in domesticated pigeons housed in a single loft

A pilot study investigating the dynamics of pigeon circovirus recombination in domesticated pigeons housed in a single loft Khalifeh, A., Kraberger, S., Dziewulska, D., Varsani, A. & Stenzel, T., Jun 2021, In: Viruses. 13, 6, 964. Research output: Contribution to journal › Article › peer-review

Identification of novel circovirus and anelloviruses from wolverines using a non-invasive faecal sampling approach

Identification of novel circovirus and anelloviruses from wolverines using a non-invasive faecal sampling approach Bandoo, R. A., Bautista, J., Lund, M., Newkirk, E., Squires, J., Varsani, A. & Kraberger, S., Sep 2021, In: Infection, Genetics and Evolution. 93, 104914. Research output: Contribution to journal › Article › peer-review

Circular DNA viruses identified in short-finned pilot whale and orca tissue samples

Circular DNA viruses identified in short-finned pilot whale and orca tissue samples Smith, K., Fielding, R., Schiavone, K., Hall, K. R., Reid, V. S., Boyea, D., Smith, E. L., Schmidlin, K., Fontenele, R. S., Kraberger, S. & Varsani, A., Jul 2021, In: Virology. 559, p. 156-164 9 p. Research output: Contribution to journal › Article … Read more

Genome sequences of microviruses identified in gila monster feces

Genome sequences of microviruses identified in gila monster feces Collins, C. L., DeNardo, D. F., Blake, M., Norton, J., Schmidlin, K., Fontenele, R. S., Wilson, M. A., Kraberger, S. & Varsani, A., Mar 18 2021, In: Microbiology Resource Announcements. 10, 11, e00163-21. Research output: Contribution to journal › Article › peer-review

Occurrence of lettuce chlorosis virus in Passiflora spp. in Brazil

Occurrence of lettuce chlorosis virus in Passiflora spp. in Brazil Vidal, A. H., Felix, G. P., Abreu, E. F. M., Nogueira, I., Alves-Freitas, D. M. T., Faleiro, F. G., Fontenele, R. S., Peixoto, J. R., Lacorte, C., Rosa, R. C. C., de Jesus, O. N., Resende, R. O., Varsani, A. & Ribeiro, S. G., 2021, … Read more

2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales Kuhn, J. H., Adkins, S., Alioto, D., Alkhovsky, S. V., Amarasinghe, G. K., Anthony, S. J., Avšič-Županc, T., Ayllón, M. A., Bahl, J., Balkema-Buschmann, A., Ballinger, M. J., Bartonička, T., Basler, C., Bavari, S., Beer, M., Bente, D. A., Bergeron, … Read more

VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses

VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses Guo, J., Bolduc, B., Zayed, A. A., Varsani, A., Dominguez-Huerta, G., Delmont, T. O., Pratama, A. A., Gazitúa, M. C., Vik, D., Sullivan, M. B. & Roux, S., Dec 2021, In: Microbiome. 9, 1, 37. Research output: Contribution to journal › Article › … Read more

Pan-Enterovirus Amplicon-Based High-Throughput Sequencing Detects the Complete Capsid of a EVA71 Genotype C1 Variant via Wastewater-Based Epidemiology in Arizona

Pan-Enterovirus Amplicon-Based High-Throughput Sequencing Detects the Complete Capsid of a EVA71 Genotype C1 Variant via Wastewater-Based Epidemiology in Arizona Faleye, T. O. C., Driver, E., Bowes, D., Adhikari, S., Adams, D., Varsani, A., Halden, R. U. & Scotch, M., Jan 7 2021, In: Viruses. 13, 1 Research output: Contribution to journal › Article › peer-review

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