Varsani Lab - the viral kind
We are a wild 'viral' molecular virology research group that works across ecosystems studying viral dynamics.
Our broader objectives are to
- Study viral dynamics in Ross Sea (Antarctica) ecosystem which is recognised as anthropogenically the least-altered marine system on the planet with no evidence indicating introduction or range expansion of any species thus far, despite its changing physical environment.
- Unravel the viral evolutionary dynamics as a consequence of climate change.
- Study viral ecological interaction networks within a microbiome to unravel the dynamics of pathogen emergence.
Arvind Varsani
I am a molecular virologist who works across ecosystems from plants to animals and from the tropics to the Antarctic. My research uses a combination of traditional virology, microscopy (including transmission electron microscopy), molecular and cellular biology techniques in conjunction with modern sequencing techniques, synthetic biology and bioinformatics to characterise viruses and understand their dynamics.
Arizona State University, Tempe, USA
07/2016 - Current: Associate Professor at the Biodesign Institute and School of Life Sciences
University of Canterbury, Christchurch, New Zealand
02/2009 - 07/2016: Senior lecturer / researcher in School of Biological Sciences
University of Cape Town, Cape Town, South Africa
07/2003 - 09/2008: Lecturer in the Structural Biology Research Unit
University of Cape Town, Cape Town, South Africa
1998 - 2003: PhD in Molecular and cell biology
Loughborough University, Loughborough, England
1993 - 1997: BSc, DIS in Medicinal and Pharmaceutical Chemistry
Publications
ICTV virus taxonomy profile: Geminiviridae
ICTV virus taxonomy profile: Geminiviridae ICTV Report Consortium, Feb 1 2017, In : Journal of General Virology. 98, 2, p. 131-133 3 p., 000738. Research output: Contribution to journal › Article
Minimum information about an uncultivated virus genome (MIUVIG)
Minimum information about an uncultivated virus genome (MIUVIG) Roux, S., Adriaenssens, E. M., Dutilh, B. E., Koonin, E. V., Kropinski, A. M., Krupovic, M., Kuhn, J. H., Lavigne, R., Brister, J. R., Varsani, A., Amid, C., Aziz, R. K., Bordenstein, S. R., Bork, P., Breitbart, M., Cochrane, G. R., Daly, R. A., Desnues, C., Duhaime, … Read more
Diverse single-stranded DNA viruses associated with honey bees (Apis mellifera)
Diverse single-stranded DNA viruses associated with honey bees (Apis mellifera) Kraberger, S., Cook, C. N., Schmidlin, K., Fontenele, R. S., Bautista, J., Smith, B. & Varsani, A., Jul 1 2019, In : Infection, Genetics and Evolution. 71, p. 179-188 10 p. Research output: Contribution to journal › Article
Evidence of age-related improvement in the foraging efficiency of Adélie penguins
Evidence of age-related improvement in the foraging efficiency of Adélie penguins Lescroël, A., Ballard, G., Massaro, M., Dugger, K., Jennings, S., Pollard, A., Porzig, E., Schmidt, A., Varsani, A., Grémillet, D. & Ainley, D., Dec 1 2019, In : Scientific reports. 9, 1, 3375. Research output: Contribution to journal › Article
Additional changes to taxonomy ratified in a special vote by the International Committee on Taxonomy of Viruses (October 2018)
Additional changes to taxonomy ratified in a special vote by the International Committee on Taxonomy of Viruses (October 2018) Siddell, S. G., Walker, P. J., Lefkowitz, E. J., Mushegian, A. R., Adams, M. J., Dutilh, B. E., Gorbalenya, A. E., Harrach, B., Harrison, R. L., Junglen, S., Knowles, N. J., Kropinski, A. M., Krupovic, M., … Read more
First world report of cucurbit aphid-borne yellows virus infecting passionfruit
First world report of cucurbit aphid-borne yellows virus infecting passionfruit Vidal, A. H., Sanches, M. M., Alves-Freitas, D. M. T., Abreu, E. F. M., Lacorte, C., Pinheiro-Lima, B., Rosa, R. C. C., Jesus, O. N., Campos, M. A., Varsani, A. & Ribeiro, S. G., Jan 1 2018, In : Plant Disease. 102, 12, 1 p. … Read more
